Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Adult
Cell type
Ovary
NA
NA

Attributes by original data submitter

Sample

strain
rhiP-GFP-Hin
age
2-4 days
sex
female
tissue
ovary
sample_type
DNA
custom name
GFP ChIP for rhiP-GFP-Hin ovary

Sequenced DNA Library

library_name
ChIP-seq of GFP tagged Hin in WT ovary
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
NextSeq 500

dm6

Number of total reads
39636082
Reads aligned (%)
77.4
Duplicates removed (%)
73.1
Number of peaks
2537 (qval < 1E-05)

dm3

Number of total reads
39636082
Reads aligned (%)
77.9
Duplicates removed (%)
71.3
Number of peaks
5877 (qval < 1E-05)

Base call quality data from DBCLS SRA