Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
TP53

Cell type

Cell type Class
Kidney
Cell type
UO-31
Primary Tissue
Kidney
Tissue Diagnosis
Unknown

Attributes by original data submitter

Sample

source_name
UO31
cell line
UO31
treated with
4GY for 2hrs
chip antibody
anti-p53 antibody (DO-1, Santa Cruz Biotechnology, SC-126X, Lot:G0115)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
25705617
Reads aligned (%)
63.7
Duplicates removed (%)
22.8
Number of peaks
1163 (qval < 1E-05)

hg38

Number of total reads
25705617
Reads aligned (%)
64.6
Duplicates removed (%)
22.1
Number of peaks
1184 (qval < 1E-05)

Base call quality data from DBCLS SRA