Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Rpd3

Cell type

Cell type Class
Adult
Cell type
Adult head
NA
NA

Attributes by original data submitter

Sample

source_name
RPD3 Q3451 OR Head Nuc ChIP expt.2418
strain
Oregon-R(official name : Oregon-R-modENCODE genotype : wild type )
developmental stage
Mixed Adult
genotype
wild type

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

dm6

Number of total reads
24734451
Reads aligned (%)
90.8
Duplicates removed (%)
17.8
Number of peaks
7933 (qval < 1E-05)

dm3

Number of total reads
24734451
Reads aligned (%)
91.5
Duplicates removed (%)
15.7
Number of peaks
7621 (qval < 1E-05)

Base call quality data from DBCLS SRA