Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
HP4

Cell type

Cell type Class
Embryo
Cell type
14-16h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
HP4 Q4072 14-16 hr OR Emb ChIP expt.1649
strain
Oregon-R(official name : Oregon-R-modENCODE genotype : wild type )
developmental stage
Embryo 14-16hr OR
genotype
wild type

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

dm3

Number of total reads
12249643
Reads aligned (%)
95.9
Duplicates removed (%)
17.5
Number of peaks
2758 (qval < 1E-05)

dm6

Number of total reads
12249643
Reads aligned (%)
94.4
Duplicates removed (%)
24.9
Number of peaks
3887 (qval < 1E-05)

Base call quality data from DBCLS SRA