Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Kidney

Cell type

293

Primary Tissue

Kidney

Tissue Diagnosis

Normal

Sample

source_name

HEK293T cells

cell line

HEK293T (ATCC CRL-3216)

transfected with

None

chip antibody

None

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

ChIP was performed as described in Gupta-Hinch et al. 2014 Libraries were prepared for sequencing using standard Illumina protocols by the Oxford Genomics Centre.

Sequencing Platform

instrument_model

Illumina HiSeq 1000

hg38

Number of total reads

109927240

Reads aligned (%)

99.0

Duplicates removed (%)

5.3

Number of peaks

11399 (qval < 1E-05)

hg19

Number of total reads

109927240

Reads aligned (%)

98.5

Duplicates removed (%)

5.5

Number of peaks

11127 (qval < 1E-05)