Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
TFCP2

Cell type

Cell type Class
Liver
Cell type
BEL-7402
NA
NA

Attributes by original data submitter

Sample

source_name
liver cancer cell
cell line
Bel-7402
cell type
Hepatocellular carcinoma
antibodies
anti-TFCP2 (CST #80784)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
25119864
Reads aligned (%)
41.8
Duplicates removed (%)
26.8
Number of peaks
449 (qval < 1E-05)

hg19

Number of total reads
25119864
Reads aligned (%)
41.4
Duplicates removed (%)
27.2
Number of peaks
184 (qval < 1E-05)

Base call quality data from DBCLS SRA