Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Liver

Cell type

BEL-7402

NA

NA

Sample

source_name

liver cancer cell

cell line

Bel-7402

cell type

Hepatocellular carcinoma

antibodies

None

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Lysates were clarified from sonicated nuclei and protein-DNA complexes were isolated with antibody. Libraries were prepared according to Illumina's instructions accompanying the DNA Sample Kit (Part# 0801-0303).

Sequencing Platform

instrument_model

HiSeq X Ten

hg38

Number of total reads

31041724

Reads aligned (%)

72.8

Duplicates removed (%)

4.7

Number of peaks

737 (qval < 1E-05)

hg19

Number of total reads

31041724

Reads aligned (%)

72.3

Duplicates removed (%)

4.8

Number of peaks

337 (qval < 1E-05)