Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Sgf11

Cell type

Cell type Class
Embryo
Cell type
1-3h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
sgf11 ip
developmental stage
1-3 hr embryo
replicate
1377_2
antibody
rabbit-anti-sgf11
epitope
full length

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

dm3

Number of total reads
26750825
Reads aligned (%)
50.3
Duplicates removed (%)
20.1
Number of peaks
6109 (qval < 1E-05)

dm6

Number of total reads
26750825
Reads aligned (%)
47.8
Duplicates removed (%)
23.7
Number of peaks
6078 (qval < 1E-05)

Base call quality data from DBCLS SRA