Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
BRD4

Cell type

Cell type Class
Blood
Cell type
Akata
NA
NA

Attributes by original data submitter

Sample

source_name
Akata-Zta cells
cell line
Akata-ZTA
pathogen
Epstein-Barr virus
chip antibody
BRD4

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
61488723
Reads aligned (%)
69.2
Duplicates removed (%)
28.2
Number of peaks
1524 (qval < 1E-05)

hg38

Number of total reads
61488723
Reads aligned (%)
71.6
Duplicates removed (%)
26.5
Number of peaks
1180 (qval < 1E-05)

Base call quality data from DBCLS SRA