Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Blood

Cell type

Natural Killer T-Cells

MeSH Description

A specific natural killer T-cell subtype that expresses an invariant T-cell receptor alpha-chain.

Sample

source_name

ChIP_NKT_Input

strain

C57BL/6

tissue

Thymus

cell type

NKT

antibodies

None

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Illumina TruSeq DNA Sample Preparation Guide (Part# 15026486).

Sequencing Platform

instrument_model

Illumina HiSeq 2000

mm10

Number of total reads

64304539

Reads aligned (%)

95.3

Duplicates removed (%)

18.4

Number of peaks

598 (qval < 1E-05)

mm9

Number of total reads

64304539

Reads aligned (%)

95.0

Duplicates removed (%)

18.4

Number of peaks

657 (qval < 1E-05)