Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
RING1

Cell type

Cell type Class
Prostate
Cell type
DU 145
Primary Tissue
Prostate
Tissue Diagnosis
Carcinoma

Attributes by original data submitter

Sample

source_name
DU145 prostate cancer cells
cell line
DU145 prostate cancer cells
genotype/variation
EED knockdown
chip antibody
Anti-RING1A [rabbit, Cell Signaling, cat# 2820, lot# 1]

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
35569989
Reads aligned (%)
127.0
Duplicates removed (%)
33.2
Number of peaks
2512 (qval < 1E-05)

hg38

Number of total reads
35569989
Reads aligned (%)
127.6
Duplicates removed (%)
33.1
Number of peaks
2304 (qval < 1E-05)

Base call quality data from DBCLS SRA