Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
BCL6

Cell type

Cell type Class
Blood
Cell type
OCI-LY1
NA
NA

Attributes by original data submitter

Sample

source_name
Diffuse Large B-Cell Lymphoma
chip antibody
BCL6
chip antibody catalog number
SC-858
chip antibody manufacturer
Santa Cruz
cell line
OC-LY1
time
24 hours
concentration
0.005%
treatment
DMSO

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
21975536
Reads aligned (%)
54.1
Duplicates removed (%)
29.6
Number of peaks
2929 (qval < 1E-05)

hg38

Number of total reads
21975536
Reads aligned (%)
55.3
Duplicates removed (%)
28.7
Number of peaks
3019 (qval < 1E-05)

Base call quality data from DBCLS SRA