Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Others
Cell type
Adenoid cystic carcinoma
NA
NA

Attributes by original data submitter

Sample

source_name
Input myb ChIP on ATRA-treated ACC
xenograft
ACCx9
agent
ATRA
chip antibody
none

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
40375939
Reads aligned (%)
94.8
Duplicates removed (%)
2.8
Number of peaks
1422 (qval < 1E-05)

hg19

Number of total reads
40375939
Reads aligned (%)
94.2
Duplicates removed (%)
4.2
Number of peaks
1442 (qval < 1E-05)

Base call quality data from DBCLS SRA