Curated Sample Data


Genome
dm3
Antigen Class
Input control
Antigen
Input control
Cell type Class
Adult
Cell type
Ovary

Cell type information


NA
NA

Attributes by Original Data Submitter


source_name
Adult ovaries
genotype
w1118.tm3; ;
developmental stage
Adult
tissue
ovary
chip antibody
none

Metadata from Sequence Read Archive

Library Description


library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Lysis and sonication of formaldehyde-crosslinked ovaries NEBNext® Ultra™ DNA Library Prep Kit for Illumina® Ovaries were hand-dissected into ice-cold PBS

Platform Information


instrument_model
Illumina HiSeq 2500

External Database Query

Logs in read processing pipeline


Number of total reads
29987095
Reads aligned (%)
94.7
Duplicates removed (%)
12.8
Number of peaks
290 (qval < 1E-05)

Sequence Quality Data from DBCLS SRA