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For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For dm3
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For dm6
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: rhi
wikigenes
PDBj
CellType: Ovary
ATCC
MeSH
RIKEN BRC
SRX2734361
GSM2576140: ChIPseq antiRhino w1118 1; Drosophila melanogaster; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
rhi
Cell type
Cell type Class
Adult
Cell type
Ovary
NA
NA
Attributes by original data submitter
Sample
source_name
Adult ovaries
genotype
w1118.tm3; ;
developmental stage
Adult
tissue
ovary
chip antibody
anti-Rhino rabbit polyclonal antibody (PMID: 24906153)
Sequenced DNA Library
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Lysis and sonication of formaldehyde-crosslinked ovaries NEBNext® Ultra™ DNA Library Prep Kit for Illumina® Ovaries were hand-dissected into ice-cold PBS
Sequencing Platform
instrument_model
Illumina HiSeq 2500
Where can I get the processing logs?
Read processing pipeline
log
dm3
Number of total reads
44637373
Reads aligned (%)
0.0
Duplicates removed (%)
89.9
Number of peaks
0 (qval < 1E-05)
dm6
Number of total reads
44637373
Reads aligned (%)
0.0
Duplicates removed (%)
80.7
Number of peaks
0 (qval < 1E-05)
Base call quality data from
DBCLS SRA