SRX2713410
SA20 ChIPseq Input

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Blood
Cell type
Acute myeloid leukemia
NA
NA

Attributes by original data submitter

Sample

biomaterial_provider
Not applicable
sample_name
SA20
isolate
Not applicable
age
Not applicable
cell_type
AML
sex
Not applicable
sample_title
34-055/0311
tissue
Blood

Sequenced DNA Library

library_name
Prim78
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
24152046
Reads aligned (%)
98.3
Duplicates removed (%)
2.3
Number of peaks
605 (qval < 1E-05)

hg19

Number of total reads
24152046
Reads aligned (%)
97.4
Duplicates removed (%)
3.2
Number of peaks
871 (qval < 1E-05)

Base call quality data from DBCLS SRA