Antigen

Antigen Class

TFs and others

Antigen

INO80

Cell type

Cell type Class

Liver

Cell type

HuH-7

Primary Tissue

Liver

Tissue Diagnosis

Carcinoma Hepatocellular

Sample

source_name

INO80_Huh7

cell line

Huh7

cell type

liver cancer cell line

chip antibody

INO80

chip antibody vendor

abcam

lot

GR197880-1

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Cells were fixed in 0.3% formaldehyde for 30 minutes at 4 degrees prior to processing for ChIP using protocol from Raab et al 2015. Kapa Hyperprep kit using Illumina Truseq barcoded adapters

Sequencing Platform

instrument_model

Illumina HiSeq 2500

hg19

Number of total reads

42375927

Reads aligned (%)

97.6

Duplicates removed (%)

0.7

Number of peaks

783 (qval < 1E-05)

hg38

Number of total reads

42375927

Reads aligned (%)

98.3

Duplicates removed (%)

0.6

Number of peaks

1103 (qval < 1E-05)