SRX2705473
NB-4 H3K27ac WCE +Tami 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Blood
Cell type
NB-4
Primary Tissue
Blood
Site of Extraction
Bone Marrow
Tissue Diagnosis
Leukemia

Attributes by original data submitter

Sample

isolate
Not applicable
age
Not applicable
biomaterial_provider
Not applicable
sex
Not applicable
tissue
Not applicable
cell_line
NB-4
cell_type
AML
treatment
SY-1425

Sequenced DNA Library

library_name
CL23
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
40208193
Reads aligned (%)
97.1
Duplicates removed (%)
5.6
Number of peaks
971 (qval < 1E-05)

hg19

Number of total reads
40208193
Reads aligned (%)
96.2
Duplicates removed (%)
6.9
Number of peaks
1085 (qval < 1E-05)

Base call quality data from DBCLS SRA