SRX2705463
OCI-M1 H3K27Ac IP Treated 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Blood
Cell type
OCI-M1
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Myelogenous

Attributes by original data submitter

Sample

isolate
Not applicable
age
Not applicable
biomaterial_provider
Not applicable
sex
Not applicable
tissue
Not applicable
cell_line
OCI-M1
cell_type
AML
treatment
SY-1425

Sequenced DNA Library

library_name
CL35
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
40340236
Reads aligned (%)
96.7
Duplicates removed (%)
61.1
Number of peaks
25698 (qval < 1E-05)

hg19

Number of total reads
40340236
Reads aligned (%)
96.3
Duplicates removed (%)
61.7
Number of peaks
25490 (qval < 1E-05)

Base call quality data from DBCLS SRA