SRX2705452
MV-4-11 Treated 3 H3K27ac IP

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Blood
Cell type
MV-4-11
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Myelogenous

Attributes by original data submitter

Sample

isolate
Not applicable
age
Not applicable
biomaterial_provider
Not applicable
sex
Not applicable
tissue
Not applicable
cell_line
MV-4-11
cell_type
AML
treatment
SY-1425

Sequenced DNA Library

library_name
CL46
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
30829781
Reads aligned (%)
98.2
Duplicates removed (%)
13.7
Number of peaks
38454 (qval < 1E-05)

hg19

Number of total reads
30829781
Reads aligned (%)
97.9
Duplicates removed (%)
13.8
Number of peaks
38311 (qval < 1E-05)

Base call quality data from DBCLS SRA