SRX2705448
NB-4 H3K27ac IP +Tami 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Blood
Cell type
NB-4
Primary Tissue
Blood
Site of Extraction
Bone Marrow
Tissue Diagnosis
Leukemia

Attributes by original data submitter

Sample

isolate
Not applicable
age
Not applicable
biomaterial_provider
Not applicable
sex
Not applicable
tissue
Not applicable
cell_line
NB-4
cell_type
AML
treatment
SY-1425

Sequenced DNA Library

library_name
CL50
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
41391248
Reads aligned (%)
97.0
Duplicates removed (%)
8.8
Number of peaks
40604 (qval < 1E-05)

hg19

Number of total reads
41391248
Reads aligned (%)
96.5
Duplicates removed (%)
9.6
Number of peaks
40237 (qval < 1E-05)

Base call quality data from DBCLS SRA