SRX2705437
OCI-AML3 RARA IP Treated 2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Blood
Cell type
OCI-AML3
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Myelogenous

Attributes by original data submitter

Sample

isolate
Not applicable
age
Not applicable
biomaterial_provider
Not applicable
sex
Not applicable
tissue
Not applicable
cell_line
OCI-AML3
cell_type
AML
treatment
SY-1425

Sequenced DNA Library

library_name
CL61
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
40521481
Reads aligned (%)
95.5
Duplicates removed (%)
84.7
Number of peaks
4345 (qval < 1E-05)

hg19

Number of total reads
40521481
Reads aligned (%)
94.8
Duplicates removed (%)
86.2
Number of peaks
4300 (qval < 1E-05)

Base call quality data from DBCLS SRA