Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Blood
Cell type
MV-4-11
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Myelogenous

Attributes by original data submitter

Sample

source_name
MV4;11 cell line
tissue
peripheral blood
cell line
MV4;11
clickable molecule
JQ1–TCO

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Lysate were isolated from formaldehybe cross-linked cells and sonicated to release the chromatin, then chem-precipitation was performed with pre-clicked JQ1 biotin conjugated beads ThruPLEXTM-FD Prep Kit protocol (Rubicon Genomics)

Sequencing Platform

instrument_model
NextSeq 500

hg38

Number of total reads
18315587
Reads aligned (%)
83.0
Duplicates removed (%)
49.6
Number of peaks
24860 (qval < 1E-05)

hg19

Number of total reads
18315587
Reads aligned (%)
82.8
Duplicates removed (%)
49.9
Number of peaks
24741 (qval < 1E-05)

Base call quality data from DBCLS SRA