Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CBFB

Cell type

Cell type Class
Blood
Cell type
ME-1
Primary Tissue
Bone Marrow
Tissue Diagnosis
Leukemia Acute Myelogenous

Attributes by original data submitter

Sample

source_name
ME-1 cell line (leukemic)
cell type
leukemic cell line
cell line
ME-1
antibody target
CBFB
antibody company
Diagenode
antibody catalogue number
sc-20693
treatment
none

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
38907100
Reads aligned (%)
51.6
Duplicates removed (%)
35.8
Number of peaks
28068 (qval < 1E-05)

hg38

Number of total reads
38907100
Reads aligned (%)
52.6
Duplicates removed (%)
35.1
Number of peaks
28186 (qval < 1E-05)

Base call quality data from DBCLS SRA