SRX264463
GSM1121097: Input for cdk7 ChIP; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CDK7

Cell type

Cell type Class
Blood
Cell type
MM.1S
Primary Tissue
Blood
Tissue Diagnosis
Multiple Myeloma

Attributes by original data submitter

Sample

GEO Accession
GSM1121097
chip antibody
Cdk7
antibody catalog number
Bethyl A300-405A
cell type
MM1.S

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg19

Number of total reads
20364696
Reads aligned (%)
82.1
Duplicates removed (%)
12.0
Number of peaks
586 (qval < 1E-05)

hg38

Number of total reads
20364696
Reads aligned (%)
82.8
Duplicates removed (%)
11.3
Number of peaks
440 (qval < 1E-05)

Base call quality data from DBCLS SRA