SRX2638277
STAT6 ChIP-seq analysis of untreated human differentiating macrophages (rep2)

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Blood
Cell type
PBMC
Tissue
blood
Lineage
mesoderm
Description
peripheral blood mononuclear cells

Attributes by original data submitter

Sample

isolate
hMQL
age
N/A
biomaterial_provider
Regional Blood Bank of Debrecen
sex
not applicable
tissue
blood
cell_type
PBMC
health_state
healthy

Sequenced DNA Library

library_name
hs_MQ_ctrl_STAT6_rep2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
41336792
Reads aligned (%)
98.1
Duplicates removed (%)
12.2
Number of peaks
1448 (qval < 1E-05)

hg19

Number of total reads
41336792
Reads aligned (%)
97.1
Duplicates removed (%)
13.8
Number of peaks
1356 (qval < 1E-05)

Base call quality data from DBCLS SRA