Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
TCF7

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

age
53 year
dev stage
adult
donor ID
ENCDO000AAD
sex
female
health state
chronic myelogenous leukemia (CML)
sample type
immortalized cell line
cell line
K562
passage number
6
lab
Richard Myers, HAIB

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
25865073
Reads aligned (%)
96.7
Duplicates removed (%)
5.1
Number of peaks
1872 (qval < 1E-05)

hg19

Number of total reads
25865073
Reads aligned (%)
96.3
Duplicates removed (%)
5.8
Number of peaks
1859 (qval < 1E-05)

Base call quality data from DBCLS SRA