Antigen

Antigen Class

Histone

Antigen

H3K4me2

Cell type

Cell type Class

Blood

Cell type

OCI-LY-7

Primary Tissue

Blood

Tissue Diagnosis

Lymphoma B-cell

Sample

age

48 year

dev stage

adult

donor ID

ENCDO351AAA

sex

male

health state

B cell lymphoma

sample type

immortalized cell line

cell line

OCI-LY7

lab

Bradley Bernstein, Broad

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

extraction method: see document general protocol: https://www.encodeproject.org/documents/a47aaf7e-38f5-4326-914a-98991f61345a/@@download/attachment/Alon%27s%20SCN%20revised.pdf

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

28754166

Reads aligned (%)

98.0

Duplicates removed (%)

14.4

Number of peaks

35770 (qval < 1E-05)

hg19

Number of total reads

28754166

Reads aligned (%)

97.6

Duplicates removed (%)

15.0

Number of peaks

35711 (qval < 1E-05)