Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

dev stage
adult
cell type
B cell
sex
female
sample type
primary cell
donor ID
ENCDO114AAA
age
43 year
health state
normal
lab
Bradley Bernstein, Broad

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
extraction method: see document general protocol: https://www.encodeproject.org/documents/f10bdd36-e370-4777-a7f3-83091c115749/@@download/attachment/wgEncodeBroadHistone.html.pdf

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg38

Number of total reads
97435641
Reads aligned (%)
91.3
Duplicates removed (%)
31.0
Number of peaks
1883 (qval < 1E-05)

hg19

Number of total reads
97435641
Reads aligned (%)
90.4
Duplicates removed (%)
33.0
Number of peaks
1627 (qval < 1E-05)

Base call quality data from DBCLS SRA