Antigen

Antigen Class

Histone

Antigen

H4K20me1

Cell type

Cell type Class

Blood

Cell type

SU-DHL-6

Primary Tissue

Blood

Tissue Diagnosis

Lymphoma

Sample

age

43 year

dev stage

adult

donor ID

ENCDO353AAA

sex

male

health state

large cell lymphoma; diffuse mixed histiocytic and lymphocytic lymphoma; follicular B cell lymphoma

sample type

immortalized cell line

cell line

SUDHL6

lab

Bradley Bernstein, Broad

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

extraction method: see document general protocol: https://www.encodeproject.org/documents/18f0d330-5799-45f7-babe-7728dfbd1103/@@download/attachment/Epigenomics_Mag%20Bead_ChIP_Protocol_v01.4_exp.pdf

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

39890618

Reads aligned (%)

95.2

Duplicates removed (%)

2.4

Number of peaks

771 (qval < 1E-05)

hg19

Number of total reads

39890618

Reads aligned (%)

94.4

Duplicates removed (%)

3.9

Number of peaks

1050 (qval < 1E-05)