Antigen

Antigen Class

Histone

Antigen

H3K27ac

Cell type

Cell type Class

Blood

Cell type

SU-DHL-6

Primary Tissue

Blood

Tissue Diagnosis

Lymphoma

Sample

dev stage

adult

cell line

SUDHL6

sex

male

sample type

immortalized cell line

donor ID

ENCDO353AAA

age

43 year

health state

large cell lymphoma; diffuse mixed histiocytic and lymphocytic lymphoma; follicular B cell lymphoma

lab

Bradley Bernstein, Broad

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

general protocol: https://www.encodeproject.org/documents/eaafee87-23f3-4bb4-adb1-585af01db120/@@download/attachment/ChIP%20New%20General%20ChIP%20Protocol%20041510%20v05.pdf

Sequencing Platform

instrument_model

Illumina HiSeq 2500

hg38

Number of total reads

27457742

Reads aligned (%)

95.9

Duplicates removed (%)

23.5

Number of peaks

22002 (qval < 1E-05)

hg19

Number of total reads

27457742

Reads aligned (%)

95.5

Duplicates removed (%)

24.0

Number of peaks

22031 (qval < 1E-05)