Antigen

Antigen Class

Histone

Antigen

H3K4me1

Cell type

Cell type Class

Blood

Cell type

B cells

NA

NA

Sample

dev stage

adult

cell type

B cell

sex

female

sample type

primary cell

donor ID

ENCDO115AAA

age

27 year

health state

normal

lab

Bradley Bernstein, Broad

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

general protocol: https://www.encodeproject.org/documents/6ecd8240-a351-479b-9de6-f09ca3702ac3/@@download/attachment/ChIP-seq_Protocol_v011014.pdf

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

94016285

Reads aligned (%)

93.1

Duplicates removed (%)

8.0

Number of peaks

30297 (qval < 1E-05)

hg19

Number of total reads

94016285

Reads aligned (%)

92.6

Duplicates removed (%)

8.9

Number of peaks

29718 (qval < 1E-05)