Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Muscle
Cell type
C2C12
Primary Tissue
Skeletal Muscle
Tissue Diagnosis
NOS

Attributes by original data submitter

Sample

source_name
C2C12 myotubes
cell line
C2C12 cell-line
cell type
Myotube (MT)
chip antibody
IgG
chip antibody manufacturer
Santa Cruz

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
77146904
Reads aligned (%)
97.3
Duplicates removed (%)
47.0
Number of peaks
439 (qval < 1E-05)

mm9

Number of total reads
77146904
Reads aligned (%)
97.0
Duplicates removed (%)
47.8
Number of peaks
488 (qval < 1E-05)

Base call quality data from DBCLS SRA