SRX262218
GSM1116754: PHF6 ChIP-seq in Jurkat; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
PHF6

Cell type

Cell type Class
Blood
Cell type
Jurkat
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Lymphocytic

Attributes by original data submitter

Sample

source_name
T-ALL cell line
chip antibody
PHF6
antibody catalog number
Bethyl A301-451A
cell type
Jurkat

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
12526079
Reads aligned (%)
73.2
Duplicates removed (%)
18.7
Number of peaks
330 (qval < 1E-05)

hg19

Number of total reads
12526079
Reads aligned (%)
72.5
Duplicates removed (%)
20.2
Number of peaks
362 (qval < 1E-05)

Base call quality data from DBCLS SRA