Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Digestive tract

Cell type

Intestines

MeSH Description

The section of the alimentary canal from the STOMACH to the ANAL CANAL. It includes the LARGE INTESTINE and SMALL INTESTINE.

Sample

source_name

Intestine

strain background

C57BL/6

age

post natal 2 months

tissue

intestine

chip antibody

none

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

The chromatin was prepared and followed by ChIP-Seq analysis by Active Motif, Inc. using the antibody against H3K36me3(abcam). Libraries were prepared for sequencing using standard Illumina protocols.

Sequencing Platform

instrument_model

NextSeq 500

mm10

Number of total reads

32155317

Reads aligned (%)

98.2

Duplicates removed (%)

6.3

Number of peaks

461 (qval < 1E-05)

mm9

Number of total reads

32155317

Reads aligned (%)

98.1

Duplicates removed (%)

6.4

Number of peaks

455 (qval < 1E-05)