Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
Monocytes
MeSH Description
Large, phagocytic mononuclear leukocytes produced in the vertebrate BONE MARROW and released into the BLOOD; contain a large, oval or somewhat indented nucleus surrounded by voluminous cytoplasm and numerous organelles.

Attributes by original data submitter

Sample

source_name
blood
cell type
Ly6C+ monocytes
age
8W
Sex
female
strain
C57BL6
chip antibody
none

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
https://www.ncbi.nlm.nih.gov/pubmed/25103404

Sequencing Platform

instrument_model
NextSeq 500

mm10

Number of total reads
15341740
Reads aligned (%)
97.1
Duplicates removed (%)
12.9
Number of peaks
136 (qval < 1E-05)

mm9

Number of total reads
15341740
Reads aligned (%)
97.0
Duplicates removed (%)
13.9
Number of peaks
135 (qval < 1E-05)

Base call quality data from DBCLS SRA