Antigen

Antigen Class

TFs and others

Antigen

brm

Cell type

Cell type Class

Cell line

Cell type

S2

Source

Oregon R

Developmental Stage

late embryonic stage

Sample

source_name

Endogenous BRM IP

cell line

S2 cells

chip antibody

Monoclonal against Drosophila BRM (non-commercial)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Immunoprecipitated DNA was isolated with the ChIP cleanup and concentrator Kit (Zymo Research) Input DNA and immunoprecipitated DNA samples were used for Rubicon Thruplex-FD library preparation and sequenced in a Illumina HiSeq2500 instrument

Sequencing Platform

instrument_model

Illumina HiSeq 2500

dm6

Number of total reads

21888039

Reads aligned (%)

94.7

Duplicates removed (%)

25.2

Number of peaks

2344 (qval < 1E-05)

dm3

Number of total reads

21888039

Reads aligned (%)

95.0

Duplicates removed (%)

23.6

Number of peaks

4122 (qval < 1E-05)