Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
smc-4

Cell type

Cell type Class
Embryo
Cell type
Embryos
NA
NA

Attributes by original data submitter

Sample

source_name
whole worms
strain
N2
developmental stage
embryo
matching input
Input_N2_MxEmb_Rep16
antibody
SMC-4 OD0039 Rabbit polyclonal from Arshad Desai Lab

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

ce10

Number of total reads
17156712
Reads aligned (%)
65.1
Duplicates removed (%)
32.3
Number of peaks
900 (qval < 1E-05)

ce11

Number of total reads
17156712
Reads aligned (%)
65.1
Duplicates removed (%)
32.3
Number of peaks
900 (qval < 1E-05)

Base call quality data from DBCLS SRA