SRX257676
GSM1111796: MIX1 Rep1 ChIPSeq; Caenorhabditis elegans; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
mix-1

Cell type

Cell type Class
Embryo
Cell type
Embryos
NA
NA

Attributes by original data submitter

Sample

source_name
whole worms
strain
N2
developmental stage
embryo
matching input
Input_N2_MxEmb_Rep1
antibody
MIX-1 JL0004 Rabbit polyclonal to 837-1244 aa. (PMID:19853451) is against the antigen 837-1244 aa

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

ce10

Number of total reads
18394573
Reads aligned (%)
22.1
Duplicates removed (%)
65.0
Number of peaks
1181 (qval < 1E-05)

ce11

Number of total reads
18394573
Reads aligned (%)
22.1
Duplicates removed (%)
65.0
Number of peaks
1181 (qval < 1E-05)

Base call quality data from DBCLS SRA