Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
hcp-6

Cell type

Cell type Class
Embryo
Cell type
Embryos
NA
NA

Attributes by original data submitter

Sample

source_name
whole worms
strain
TY1072
developmental stage
embryo
matching input
Input_TY1072_MxEmb_Rep18
antibody
HCP-6 KH-HCP6 Rabbit Polyclonal to 1708-1722 aa sequence CKSAQAYHLHNIFEEDEES (PMID:19119011)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

ce10

Number of total reads
11537873
Reads aligned (%)
85.3
Duplicates removed (%)
8.4
Number of peaks
628 (qval < 1E-05)

ce11

Number of total reads
11537873
Reads aligned (%)
85.3
Duplicates removed (%)
8.4
Number of peaks
627 (qval < 1E-05)

Base call quality data from DBCLS SRA