Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
hcp-6

Cell type

Cell type Class
Embryo
Cell type
Embryos
NA
NA

Attributes by original data submitter

Sample

source_name
whole worms
strain
TY1072
developmental stage
embryo
matching input
Input_TY1072_MxEmb_Rep19
antibody
HCP-6 KH-HCP6 Rabbit Polyclonal to 1708-1722 aa sequence CKSAQAYHLHNIFEEDEES (PMID:19119011)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

ce11

Number of total reads
12641662
Reads aligned (%)
95.0
Duplicates removed (%)
8.9
Number of peaks
651 (qval < 1E-05)

ce10

Number of total reads
12641662
Reads aligned (%)
95.0
Duplicates removed (%)
8.9
Number of peaks
652 (qval < 1E-05)

Base call quality data from DBCLS SRA