SRX257656
GSM1111776: DPY26 TY1072 Rep2 ChIPSeq; Caenorhabditis elegans; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
dpy-26

Cell type

Cell type Class
Embryo
Cell type
Embryos
NA
NA

Attributes by original data submitter

Sample

source_name
whole worms
strain
TY1072
developmental stage
embryo
matching input
Input_TY1072_MxEmb_Rep18
antibody
DPY-26 JL00003 Rabbit polyclonal to 40-1262 aa. (PMID:19853451) is against the antigen 40-1262 aa

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

ce10

Number of total reads
13761013
Reads aligned (%)
86.8
Duplicates removed (%)
8.4
Number of peaks
679 (qval < 1E-05)

ce11

Number of total reads
13761013
Reads aligned (%)
86.8
Duplicates removed (%)
8.4
Number of peaks
679 (qval < 1E-05)

Base call quality data from DBCLS SRA