SRX256780
GSM1110018: NMuMG Input DNA; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Breast
Cell type
NMuMG
Tissue
Mammary Gland

Attributes by original data submitter

Sample

source_name
NMuMG cells, input
cell line
NMuMG
chip antibody
none

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
37387835
Reads aligned (%)
97.9
Duplicates removed (%)
39.6
Number of peaks
588 (qval < 1E-05)

mm9

Number of total reads
37387835
Reads aligned (%)
97.7
Duplicates removed (%)
39.7
Number of peaks
623 (qval < 1E-05)

Base call quality data from DBCLS SRA