Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
TBX2

Cell type

Cell type Class
Neural
Cell type
BE(2)-C
Primary Tissue
Brain
Site of Extraction
Bone Marrow
Tissue Diagnosis
Neuroblastoma

Attributes by original data submitter

Sample

source_name
Neuroblastoma
cell type
BE2C
chip antibody
TBX2
antibody catalog
ab33298
antibody lot
GR90328-1
young_id
20161217_5292

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
31043932
Reads aligned (%)
97.9
Duplicates removed (%)
14.9
Number of peaks
17928 (qval < 1E-05)

hg19

Number of total reads
31043932
Reads aligned (%)
97.3
Duplicates removed (%)
15.6
Number of peaks
17889 (qval < 1E-05)

Base call quality data from DBCLS SRA