Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
IRF4

Cell type

Cell type Class
Blood
Cell type
KK1
NA
NA

Attributes by original data submitter

Sample

source_name
KK1 IRF4
cell line
KK1
disease state
Adult T-cell Leukemia/Lymphoma (ATLL)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
38903654
Reads aligned (%)
82.2
Duplicates removed (%)
12.2
Number of peaks
10724 (qval < 1E-05)

hg38

Number of total reads
38903654
Reads aligned (%)
84.3
Duplicates removed (%)
10.6
Number of peaks
11026 (qval < 1E-05)

Base call quality data from DBCLS SRA