Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Gonad
Cell type
Spermatids
MeSH Description
Male germ cells derived from the haploid secondary SPERMATOCYTES. Without further division, spermatids undergo structural changes and give rise to SPERMATOZOA.

Attributes by original data submitter

Sample

source_name
spermatids
cell type
spermatids
antibody
none (input)
antibody information
NA
internal reference
120515_lane1_VLB1

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
37392125
Reads aligned (%)
98.2
Duplicates removed (%)
15.4
Number of peaks
551 (qval < 1E-05)

mm9

Number of total reads
37392125
Reads aligned (%)
98.0
Duplicates removed (%)
15.4
Number of peaks
634 (qval < 1E-05)

Base call quality data from DBCLS SRA