Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
RCOR1

Cell type

Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

GEO Accession
GSM1104359
cell type
HeLa S3
cell cycle phase
G1
antibody
CoREST
antibody information
Bethyl A300-130A (LOT#A300-130A-1)
internal reference
130104_lane5_VLB4

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
18953568
Reads aligned (%)
88.0
Duplicates removed (%)
8.7
Number of peaks
825 (qval < 1E-05)

hg38

Number of total reads
18953568
Reads aligned (%)
90.3
Duplicates removed (%)
7.5
Number of peaks
738 (qval < 1E-05)

Base call quality data from DBCLS SRA