Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
SFMBT1

Cell type

Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

GEO Accession
GSM1104357
cell type
HeLa S3
cell cycle phase
G1
antibody
SFMBT1
antibody information
custom (rb4731 LOT#110518)
internal reference
130104_lane5_VLB2

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
12151823
Reads aligned (%)
85.9
Duplicates removed (%)
9.7
Number of peaks
764 (qval < 1E-05)

hg38

Number of total reads
12151823
Reads aligned (%)
88.1
Duplicates removed (%)
8.5
Number of peaks
753 (qval < 1E-05)

Base call quality data from DBCLS SRA