Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Neural
Cell type
Neural Stem Cells
MeSH Description
Self-renewing cells that generate the main phenotypes of the nervous system in both the embryo and adult. Neural stem cells are precursors to both NEURONS and NEUROGLIA.

Attributes by original data submitter

Sample

strain
missing
isolate
missing
breed
missing
cultivar
missing
ecotype
missing
age
E14.5
dev_stage
not applicable
sex
female
tissue
neural stem cells
treatment
Input

Sequenced DNA Library

library_name
CHE172
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 4000

mm10

Number of total reads
32304179
Reads aligned (%)
99.3
Duplicates removed (%)
13.4
Number of peaks
332 (qval < 1E-05)

mm9

Number of total reads
32304179
Reads aligned (%)
99.2
Duplicates removed (%)
13.5
Number of peaks
306 (qval < 1E-05)

Base call quality data from DBCLS SRA