Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Embryo
Cell type
Embryos
NA
NA

Attributes by original data submitter

Sample

strain
Oregon R
age
6.5 - 9 hour
sex
pooled male and female
tissue
embryo
genotype
wild-type
sample_type
whole organism
replicate
rep2
assay
anti-Gro ChIP-seq

Sequenced DNA Library

library_name
gro_chip_6.5_9_2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

dm6

Number of total reads
22367998
Reads aligned (%)
52.1
Duplicates removed (%)
15.7
Number of peaks
2811 (qval < 1E-05)

dm3

Number of total reads
22367998
Reads aligned (%)
53.0
Duplicates removed (%)
12.4
Number of peaks
2684 (qval < 1E-05)

Base call quality data from DBCLS SRA